U.S. flag

An official website of the United States government

The .gov means it’s official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

  • Publications
  • Account settings

Preview improvements coming to the PMC website in October 2024. Learn More or Try it out now .

  • Advanced Search
  • Journal List
  • Int J Environ Res Public Health

Logo of ijerph

Contamination of Hospital Surfaces with Bacterial Pathogens under the Current COVID-19 Outbreak

Andrei a. pochtovyi.

1 Federal State Budget Institution “National Research Centre for Epidemiology and Microbiology Named after Honorary Academician N F Gamaleya” of the Ministry of Health of the Russian Federation, 123098 Moscow, Russia; [email protected] (D.V.V.); [email protected] (E.V.D.); moc.liamg@0avostenzukaydan (N.A.K.); ur.xednay@anihcubolokl (L.V.K.); [email protected] (A.P.T.); gro.ayelamag@grubstnig (A.L.G.)

2 Department of Virology, Biological Faculty, Lomonosov Moscow State University, 119991 Moscow, Russia; moc.liamg@07davotsuk

Daria V. Vasina

Daria d. kustova, elizaveta v. divisenko, nadezhda a. kuznetsova, olga a. burgasova.

3 Department of Infectious Diseases, Peoples’ Friendship University of Russia (RUDN University), 117198 Moscow, Russia; ur.liam@avosagrubaglo

Ludmila V. Kolobukhina

Artem p. tkachuk, vladimir a. gushchin, alexander l. gintsburg.

4 Department of Infectiology and Virology, Federal State Autonomous Educational Institution of Higher Education I M Sechenov, First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University), 119435 Moscow, Russia

Associated Data

The sequence data have been deposited in the NCBI Sequence Read Archive under accession number PRJNA737285.

The SARS-CoV-2 pandemic remains a global health issue for several reasons, such as the low vaccination rates and a lack of developed herd immunity to the evolution of SARS-CoV-2, as well as its potential inclination to elude neutralizing antibodies. It should be noted that the severity of the COVID-19 disease is significantly affected by the presence of co-infections. Comorbid conditions are caused not only by pathogenic and opportunistic microorganisms but also by some representatives of the environmental microbiome. The presence of patients with moderate and severe forms of the disease in hospitals indicates the need for epidemiological monitoring of (1) bacterial pathogens circulating in hospitals, especially the ESKAPE group pathogens, and (2) the microbiome of various surfaces in hospitals. In our study, we used combined methods based on PCR and NGS sequencing, which are widely used for epidemiological monitoring. Through this approach, we identified the DNA of pathogenic bacteria ( Klebsiella pneumoniae , Pseudomonas aeruginosa , Staphylococcus aureus , CoNS, and Achromobacter spp.) on various surfaces. We also estimated the microbiome diversity of surfaces and identified the potential reservoirs of infections using 16S rRNA profiling. Although we did not assess the viability of identified microorganisms, our results indicate the possible risks of insufficient regular disinfection of surfaces, regardless of department, at the Infectious Diseases Hospital. Controlling the transmission of nosocomial diseases is critical to the successful treatment of COVID-19 patients, the rational use of antimicrobial drugs, and timely decontamination measures.

1. Introduction

The pandemic caused by severe acute respiratory syndrome (SARS-CoV-2) continues until now due to various factors such as the lack of developed herd immunity, the evolution of SARS-CoV-2, accompanied by the growing concerns about its potential ability to escape neutralizing antibodies [ 1 , 2 , 3 ], as well as the untimely partial/complete removal of restrictive measures. A year and a half following the first recorded case of COVID-19 infection, the world’s scientific and medical community has come to a better understanding of the main features and properties of the virus, and there is no longer any doubt about the mechanisms of virus spread through airborne droplets, as well as through fomites [ 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 12 ].

The primary SARS-CoV-2 infection is often accompanied by the occurrence of various comorbid conditions in patients, leading to various complications. These complications lead to a worsened course of the disease, increased duration of the patient’s stay in the hospital, and increased probability of a fatal outcome [ 13 ]. One of the triggers that causes a comorbid state is a coinfection. The causative agents of coinfection can be presented by widespread and rare microorganisms of bacterial, viral, and other etiological origins. Among them, bacteria are among the most frequent microorganisms in coinfection [ 14 , 15 ]. At the same time, the origin, distribution, and frequency of bacterial coinfection in patients with COVID-19 diagnosis have not yet been sufficiently studied. According to researchers, the presence of bacterial infection is observed in 3.5–50% of patients with COVID-19 [ 16 , 17 ]. The causative agents of nosocomial infections, which can be acquired by patients upon admission to the hospital, are of particular concern. Coinfection with such pathogens as Staphylococcus aureus , Klebsiella pneumoniae , Pseudomonas aeruginosa , Streptococcus pneumoniae , Mycoplasma pneumoniae , and Acinetobacter baumannii were mentioned in published studies [ 16 , 18 , 19 , 20 ]. Some of the listed microorganisms belong to the ESKAPE group of pathogens and are characterized by a high propensity to develop antibiotic resistance, which is of additional concern. Moreover, coinfections with conditionally pathogenic microorganisms have been noted, such as coagulase-negative staphylococci (CoNS) and Stenotrophomonas maltophilia [ 13 , 20 ], which also represent nosocomial pathogens with a substantial impact on human health. However, it is not entirely clear whether these are hospital-acquired or endogenous opportunist species.

In this regard, it is important to monitor the microbiological composition in a hospital setting to obtain up-to-date information about the epidemiological state and the necessity to take appropriate measures to prevent the spread of various infections, including nosocomial ones. Medical staff and patients are in close contact with different solid surfaces that are of particular interest as research objects due to the ability of microorganisms to be preserved on such surfaces for at least several days [ 21 , 22 ].

Methods based on polymerase chain reaction (PCR) and sequencing are widely used for epidemiological monitoring. PCR is a rapid method used to detect pathogenic microorganisms present in small quantities [ 23 , 24 ]. On the other hand, sequencing of 16S rRNA allows assessing a broader diversity of microbial populations [ 25 ]. Despite the limitations of 16S rRNA sequencing, the combined use of these two approaches in order to study the microbiome of medical institutions allows identifying common patterns in the distribution of microorganisms, as well as detecting potential reservoirs of nosocomial infections and developing new recommendations as preventive measures to reduce the risk of outbreaks of nosocomial infections.

Our research focused on the First Moscow Infectious Diseases Hospital, where we previously evaluated the contamination of RNA SARS-CoV-2 in the air and surfaces in various department [ 26 ]. Previously, we observed the highest aerosol contamination in the Intensive Care Unit (ICU) department (up to 513 copies per m 3 of the air), while SARS-CoV-2 RNA was not detected in the aerosol in the Respiratory Infection Unit (RID). However, the surfaces were contaminated in both departments.

Thus, previous studies have been focused on the identification of the causative agent of COVID-19 [ 27 ], or identification of SARS-CoV-2, bacteria, and fungi (use cultural method) [ 28 ]. Here, we amend this omission, putting forward the main objectives of our study: (1) to identify pathogens of bacterial etiology circulating in hospitals and (2) to carry out a microbiome analysis of various surfaces in the ICU department and RID.

2. Materials and Methods

2.1. sampling and transportation.

The study was carried out in the First Moscow Infectious Diseases Hospital (Russia), one of the capital’s medical institutions designated for the treatment of patients with COVID-19. During the first wave of COVID-19, about 80 patients with moderate to severe courses of the disease were admitted every day. Depending on the severity of the disease, the patients were assigned to the Respiratory Infections Department (RID) or to the Intensive Care Unit (ICU). Visitors’ access to patients was completely restricted, regardless of the department. Samples were collected in isolation rooms and hospital wards in RID and ICU from patients over the age of 18 with a positive PCR result and a confirmed diagnosis of COVID-19. Surface samples collected in the ICU department included swabs from the floor, door handles, and artificial lung ventilation apparatus screens. In the RID, the swabs were collected from the bedside tables, toilet seats, switches, window handles, floor, and door handles.

Doctors and medical staff collected nasopharyngeal swabs from hospitalized patients to detect SARS-CoV-2 RNA on admission. Nasopharyngeal swabs were transferred to a test tube containing 0.5 mL of sterile PBS solution. These probes were used for the qPCR analysis of pathogens in patients. Samples from various surfaces were collected 2–3 days after hospitalization of patients both in their close proximity and in public areas (hallway, first-aid post, and staff room). This time interval is optimal for possible contamination of various surfaces by patients [ 29 ]. Surface samples were collected using a sterile viscose swab (Tampon-probe, MiniMed, Northridge, Russia). Before collection, the swab was premoistened in sterile PBS solution, and samples were collected from a surface area of 25 cm 2 . The volume of each swab sample from the surface was 0.5 mL. All collected samples were immediately placed in a thermo bag at +4 °C and transported within 1–2 h to the laboratory with BSL-3. Obtained samples were aliquoted and deposited for preservation at −80 °C.

2.2. Nucleic Acid Extraction

DNA was extracted using a DNeasy PowerSoil Kit (Qiagen, Hilden, Germany) according to the manufacturer’s instructions. Pure swabs, extraction reagents, and a sterile PBS solution were used as negative controls.

2.3. qPCR for Bacterial Pathogen Identification

The identification and the quantification of DNA of methicillin-sensitive and methicillin-resistant Staphylococcus aureus , as well as methicillin-resistant coagulase-negative Staphylococcus spp., were performed using the «AmpliSens ® MRSA-screen-titer-FL» reagent kit (FSB of the Central Research Institute of Epidemiology of Rospotrebnadzor, Moscow, Russia) according to the manufacturer’s instructions. The detection of Achromobacter spp., Burkholderia cepacia complex, Pseudomonas aeruginosa , and Klebsiella pneumonia was carried out as previously described ( Table S1, Supplementary Materials ) [ 30 , 31 , 32 , 33 ].

2.4. 16S rRNA Gene Amplicon Sequencing

The hypervariable V4 region of the bacterial 16S rRNA gene was amplified using the forward primer 515F, 5′–GTGCCAGCMGCCGCGGTAA–3′ and the reverse primer 806R, 5′–GGACTACHVGGGTWTCTAAT–3′ [ 34 ]. Libraries were prepared using the NEBNext ® Fast DNA Library Prep Set for Ion Torrent™ (New England Biolabs, Ipswich, MA, USA) and barcoded with the use of Ion Code™ Barcode Adapters (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. DNA sequencing was performed using the Ion S5™ XL System (Thermo Fisher Scientific, Waltham, MA, USA). The sequence data were deposited in the NCBI Sequence Read Archive under accession number PRJNA737285.

2.5. Sequence Analysis

The analysis of the demultiplexed sequences was performed using the R package DADA2 (version 1.18.0) [ 35 ]. Filtering was performed using the filterAndTrim function; reads were truncated to 250 bp and cut from the 5′ end to 15 nucleotides. The maximum number of expected errors per read was set to 2. Denoising was performed taking into account the specifics of the Ion Torrent sequencing technology (single reads and Ion Torrent error recognition) using the following parameters: HOMOPOLYMER_GAP_PENALTY = −1, BAND_SIZE = 32. Chimeras were removed by the “consensus” method. The taxonomy assignment was performed using the R package DADA2 with the naïve Bayesian classifier method using the SILVA SSU v.132 [ 36 ] as a reference database of sequences. The ASV (taxonomy) table and metadata were imported for analysis using the R package phyloseq (version 1.34.0) [ 37 ]. Reads that were not assigned to the phylum level were removed before rarefaction. Rarefaction curves were evaluated before rarefying all samples to a common read depth of 41,140, which removed only two samples. Alpha-diversity analysis was performed using Chao1 and Shannon index. The Bray–Curtis dissimilarity matrix was ordered using PCoA. PERMANOVA tests were performed using the adonis2 function in the R package vegan (version 2.5.7) for samples pertaining to different departments and descriptions (surface type).

To estimate the most important features (genera) for the correct assignment of samples, a random forest analysis (R package randomForest, version 4.6.14) with the construction of 10,001 trees, using the genera as a classifier, was performed. All ASVs were merged to the genus level. Before performing normalization using Z-score, ASVs which had a prevalence <20% and a total abundance <50 were removed. The most important genera for the correct assignment of samples to departments were detected using the average reduction in model accuracy (MDA).

2.6. Ethical Consideration

The study was approved by local the Ethics Committee of the First Moscow Infectious Diseases Hospital, Moscow Department of Health, Moscow, Russia (Protocol No. 2/B, date of approval: 20 May 2020). Written informed consent was obtained from all participants.

3.1. Detection of Bacterial Pathogens on Various Surfaces

Surface swabs were obtained from two departments of the First Moscow Infectious Diseases Hospital in general-purpose areas (hallway, staffrooms), in wards (in the RID), in the hallway, and in infectious rooms/anterooms (in the case of the ICU). A total of 13 and 22 surface swabs samples were collected in the ICU department and RID, respectively. Out of those samples, 13 were taken from the floor surface, eight were taken from the door handles, and three were taken from the surfaces of electronic devices. Nasopharyngeal swabs were collected from five and six patients in the ICU department and RID, respectively.

All samples were evaluated for the presence of methicillin-sensitive and methicillin-resistant Staphylococcus aureus , methicillin-resistant CoNS, Achromobacter spp., Burkholderia cepacia complex, Pseudomonas aeruginosa , and Klebsiella pneumoniae . PCR analysis estimated that all surface samples were contaminated with at least one pathogen from the test list ( Table 1 ).

Number of positive detections in surface samples and in nasopharyngeal swabs from patients by PCR.

Bacterial PathogenIntensive Care UnitRespiratory Infections
Department
Surface
( = 13)
Patient
( = 5)
Surface
( = 22)
Patient
( = 6)
13 (100%)0 (0%)14 (63.64%)0 (0%)
1 (7.69%)0 (0%)6 (27.27%)0 (0%)
2 (15.38%)0 (0%)0 (0%)0 (0%)
CoNS13 (100%)0 (0%)22 (100%)0 (0%)
spp.3 (23.08%)0 (0%)3 (13.64%)0 (0%)
complex0 (0%)0 (0%)0 (0%)0 (0%)

The most widespread microorganisms were CoNS ( n = 35), which were found in all samples, regardless of the collection site. Klebsiella pneumoniae was identified in 100% of ICU samples and in 64% of RID samples. Thus, these two species were the main contaminants under the studied conditions. In addition, Achromobacter spp. (23%), Staphylococcus aureus (15%), and Pseudomonas aeruginosa (8%) were detected in the ICU. For RID, the distribution was slightly different, with Pseudomonas aeruginosa identified in about one-third of the samples (27%) and Achromobacter spp. identified in 14% of samples, while no Staphylococcus aureus was detected. Burkholderia cepacia complex was not found in any of the samples. The most contaminated surfaces were the floor (100%) and door handles (100%) ( Table S2, Supplementary Materials ).

3.2. Taxonomy Composition of Departments and Surface Types

Strict parameters of filtration quality and elimination of chimeric sequences were applied to microbiome data. After all filtering steps and elimination of low-quality reads, as well as chimeric sequences, 2,389,555 classified sequences were obtained and assigned to 8873 amplicon sequence variants (ASV) related to 990 genera and 357 families. All samples have reached a saturation point regarding α-diversity at a depth of 41,140 reads.

The taxonomic distribution was identical between the two departments at the family level ( Figure 1 a). The first eight most frequent families were almost identical for the mentioned departments. The main differences in the 15 most widespread families were Weeksellaceae, Sphingomonadaceae, and Oxalobacteraceae for the ICU department, whereas, for the RID, there were Flavobacteriaceae, Aerococcaceae, and Prevotellaceae families. We also identified distinctions in the dominance of the most common families depending on the surface type ( Figure 1 b and Figure S1, Supplementary Materials ).

An external file that holds a picture, illustration, etc.
Object name is ijerph-18-09042-g001.jpg

Relative taxonomic distribution at the family level: ( a ) by department; ( b ) by department and surface type. Families with a proportion of <2% are listed as “Other”. ICU—Intensive Care Unit; RID—Respiratory Infections Department.

3.3. Diversity

The alpha-diversity did not differ significantly between the samples collected in the ICU department and RID regarding the Chao1 and Shannon index (excluding floor surface comparison, p = 0.041) ( Figure 2 , Table S2 and Figure S2, Supplementary Materials ).

An external file that holds a picture, illustration, etc.
Object name is ijerph-18-09042-g002.jpg

Dependence of α-diversity on the department and surface type: ( a ) diversity measured by the Chao1 index; ( b ) diversity measured by the Shannon index. ICU—Intensive Care Unit; RID—Respiratory Infections Department. Box plots with middle line denote the median, the box denotes the interquartile range (IQR), and 1.5 IQR ranges (whiskers). ns—no significance detected.

According to the observed diversity, it is worth noting that Chao1 was higher for the floor surface regardless of the department, and the mean ± standard deviation value was 1234.7 ± 254.22 and 939.6 ± 547.46 for the ICU and RID, respectively. This pattern was maintained for the Shannon index, with the mean ± standard deviation of 5.64 ± 0.82 (ICU department) and 4.66 ± 0.87 (RID). It was approximately at the same level for door handles and other types of surfaces (swabs from sinks, toilet seats, and bedside table surfaces). Overall, the PCR results were reproduced, and the samples from the floor surface showed better diversity.

We performed beta-diversity analysis by using PCoA based on Bray–Curtis dissimilarities. There were demonstrated both common and unique clusters for each department ( Figure 3 and Figure S3, Supplementary Materials ).

An external file that holds a picture, illustration, etc.
Object name is ijerph-18-09042-g003.jpg

Bray–Curtis dissimilarity PCoA was used to generate ordination of beta-diversity in two departments. Principal coordinates 1 and 2 (Axis.1 and Axis.2) explained 28% and 17.6% of the variance in Bray–Curtis dissimilarity, respectively. Samples are colored according to the department (ICU—Intensive Care Unit; RID—Respiratory Infections Department), symbols indicate the type of sample.

For the samples obtained from the floor in the ICU, we observed the formation of a separate cluster, indicating the high diversity of these samples. Other samples were evenly distributed throughout. We found significant differences in the multivariate PERMANOVA model with predictors such as department and description (surface type) (F = 3.48, R 2 = 0.091, p = 0.0015 and F = 2.24, R 2 = 0.125, p = 0.0036, respectively; Table S3, Supplementary Materials ).

3.4. Search for Microbial Indicators of Departments

We used random forest and genera as classification features for department identification. This model had an out-of-bag error rate of 25.71%, with a substantial class error (42.86%) estimated for six ICU samples mistakenly assigned to RID. This may have been due to the large number of samples involved in the creation of such a model (21 RID samples versus 14 ICU samples). Prevotella , Polaromonas , Psychrobacter , and Corynebacterium were the most important genera for the precise classification of departments (MDA: 30.349, 20.570, 16.659, and 15.686, respectively; Figure 4 and Table S4, Supplementary Materials ).

An external file that holds a picture, illustration, etc.
Object name is ijerph-18-09042-g004.jpg

Random forest classification analysis of ICU ( n = 12) and RID ( n = 21) samples, showing taxonomic features with the highest classification variable importance for correctly identifying the department. ICU—Intensive Care Unit; RID—Respiratory Infections Department.

4. Discussion

The presence of coinfection among COVID-19 patients has been demonstrated in a growing number of studies. The conducted meta-analyses showed extremely heterogeneous data on the number of coinfections, reaching up to 50% of cases [ 16 ]. At the same time, nosocomial infections play a significant role in the formation of coinfection, influencing the course of the disease and increasing mortality [ 18 ].

Many recommendations for coronavirus infection treatment include the use of antibacterial drugs as a preventative measure against bacterial infections [ 38 , 39 , 40 ]. This certainly raises concerns about the overuse of antibiotics and the emergence of multidrug-resistant bacteria, which is already a global public health problem. Monitoring is required for bacterial pathogen identification given the high chances of transmission of bacterial infections in hospital settings and the necessity for rational use of antibiotics. This information will allow eliminating the reservoirs of infections and promptly preventing outbreaks of nosocomial infections.

Hospital surfaces are often contaminated with various microorganisms and can be potential reservoirs for the spread of microbial agents [ 22 ]. In this regard, we studied various surfaces in the Infectious Diseases Hospital in Moscow. The choice of surfaces for our study was determined by the characteristics of each department. Patients in critical condition were admitted to the ICU department. Given the immobility of these patients, our attention was focused on surfaces such as the floor, door handles, and artificial lung ventilation apparatus screens, i.e., the main surfaces that the medical staff comes into contact with on a daily basis. On the other hand, in the RID, patients can move around inside their wards and visit the bathrooms. In this regard, we expanded the list of studied surfaces and included bedside tables, toilet seats, switches, window handles, etc. ( Table S2 Supplementary Materials ).

In our study, all the surfaces were contaminated with at least one pathogen, regardless of the department. CoNS and Klebsiella pneumoniae were the most frequently detected pathogens and were found in almost every surface swab test (for CoNS in all samples). In general, coagulase-negative staphylococcus represents the normal human skin flora and is less pathogenic than Staphylococcus aureus [ 41 ]. However, cases of CoNS bloodstream infections (BSI) and catheter-related bloodstream infections (CRBSI) have been reported among patients with COVID-19 [ 13 ]. At the same time, Klebsiella pneumoniae has been associated with several nosocomial outbreaks and occurs in patients alongside new coronavirus infection [ 18 , 29 , 42 , 43 ].

A search for pathogens such as Achromobacter spp. and Burkholderia cepacia complex was also conducted. These microorganisms are usually identified among people with weakened immune systems and patients with cystic fibrosis. Recently, these microorganisms have been noted as etiological agents that can cause pneumonia [ 44 , 45 ]. Importantly, only Burkholderia cepacia complex was found in the respiratory tract of patients with COVID-19 [ 46 , 47 ].

The microbiome study allowed us to confirm the assumptions regarding the diversity of bacterial composition on the floor surface and door handle. The results of qPCR and microbiome sequencing data were consistent.

Polaromonas , Sphingomonas , and Massilia genera were the most characteristic for the ICU department, while Prevotella , Psychrobacter , Corynebacterium , and Veillonella genera were the most characteristic for the RID. The genera data can be considered as a “marker” for department identification. It is worth noting that these genera are representative of both a normal human microflora and an ordinary environment. However, some representatives from this list have been found in the bloodstream of COVID-19 patients ( Sphingomonas [ 48 ]), whereas representatives of Prevotella were more common in the upper respiratory tract among patients with SARS-CoV-2 infection and Corynebacterium was represented among healthy patients [ 49 ]. Oropharyngeal microbiome analysis of patients with COVID-19 demonstrated high levels of Veillonella [ 50 ].

In addition, Staphylococcus aureus and Pseudomonas aeruginosa were identified on the door handles and floor surface. Moreover, Pseudomonas aeruginosa was found on the sink mixer located in the ward. In previous studies, contamination with these microorganisms on door handles was also demonstrated. It is worth noting that the detection rate of such pathogens was higher in studies similar to ours (more than 6%) [ 22 , 51 ]. However, given the pathogenic potential of these microorganisms, their detection in the ICU department is of particular concern. The results of our study on Klebsiella pneumoniae , Pseudomonas pneumoniae , and Staphylococcus aureus spread are consistent with previously published data, despite the peculiarities of health systems in different countries [ 52 , 53 , 54 , 55 ]. These microorganisms are inclined toward biofilm formation and possess other pathogenicity factors [ 29 ], which increase the risk of infection in patients with coronavirus infection.

More importantly, the nasopharyngeal smears of patients admitted to the hospital did not contain above-mentioned pathogens; therefore, we consider the patients themselves an unlikely source of contamination for the surrounding surfaces. Apparently, the spread of pathogens may be enhanced by medical staff, whereas it may also be associated with low cleaning efficiency and contamination by previously hospitalized patients.

Taking the obtained results into account, these surfaces (floor and door handles) can be considered as potential reservoirs of nosocomial infections that increase the risk of infection spread both inside and outside the hospital. The results indicate the danger of insufficient regular disinfection of surfaces, regardless of department, at the Infectious Diseases Hospital.

5. Conclusions

In this study, we demonstrated a combined approach to characterize the microbiome of different surfaces for the presence of pathogens that could induce comorbid conditions in patients with COVID-19. Epidemiological monitoring is extremely important for preventing the outbreaks of disease in a hospital setting as well as for the rational use of antimicrobial drugs and timely implementation of decontamination measures. This will improve the epidemiological situation and improve the quality of medical care.

Supplementary Materials

The following are available online at https://www.mdpi.com/article/10.3390/ijerph18179042/s1 , Table S1: List of oligonucleotide primers used in this study. Table S2: Swab collection points from various surfaces. Table S3: PERMANOVA model, with predictors department and description explaining 21.5% of among-sample diversity (Bray–Curtis dissimilarity). Table S4: Random forest classification models of department. Figure S1: Relative taxonomic distribution at the family level for all surface types. Families with a proportion of <2% are listed as “Other”. Figure S2: Dependence of α-diversity on the department and surface types: (a) diversity measured by the Chao1 index; (b) diversity measured by the Shannon index. Figure S3: Ordination of beta-diversity in two departments and surface types. Bray–Curtis dissimilarity PCoA was used to characterize the diversity. Samples are colored according to the type of surface; symbol indicates the department.

Author Contributions

Conceptualization, A.A.P., V.A.G. and A.L.G.; methodology, A.A.P., D.D.K., E.V.D., N.A.K., A.A.P. and V.A.G.; data collection and processing, A.A.P., D.D.K., E.V.D. and N.A.K.; collection and description of clinical material, O.A.B. and L.V.K.; sequencing, A.A.P. and D.D.K.; formal analysis, A.A.P., D.V.V. and N.A.K.; data curation, A.A.P. and D.D.K.; writing—original draft preparation, A.A.P.; writing—review and editing, D.V.V., N.A.K., A.P.T. and V.A.G.; visualization, A.A.P. and D.D.K.; project administration, A.A.P., V.A.G. and A.L.G.; funding acquisition, V.A.G. and A.L.G. All authors have read and agreed to the published version of the manuscript.

This work was supported by the Ministry of Health of the Russian Federation and carried out in the frame of State assignment 056-00034-20-00.

Institutional Review Board Statement

The study was conducted according to the guidelines of the Declaration of Helsinki, and approved by the Institutional local the Ethics Committee of the First Moscow Infectious Diseases Hospital, Moscow Department of Health, Moscow, Russia (Protocol No. 2/B, date of approval: 20 May 2020). Written informed consent was obtained from all participants.

Informed Consent Statement

Informed consent was obtained from all subjects involved in the study.

Data Availability Statement

Conflicts of interest.

The authors declare no conflict of interest. The funders had no role in the design of this study; in the collection, analysis, or interpretation of data; in the writing of the manuscript; or in the decision to publish the results.

Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

U.S. flag

An official website of the United States government

The .gov means it’s official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

  • Publications
  • Account settings
  • My Bibliography
  • Collections
  • Citation manager

Save citation to file

Email citation, add to collections.

  • Create a new collection
  • Add to an existing collection

Add to My Bibliography

Your saved search, create a file for external citation management software, your rss feed.

  • Search in PubMed
  • Search in NLM Catalog
  • Add to Search

Hospital waste management system - a case study of a south Indian city

Affiliation.

  • 1 Health Studies Area, Administrative Staff College of India, Bella Vista, Khairatabad, Hyderabad, India. [email protected]
  • PMID: 19470535
  • DOI: 10.1177/0734242X09104128

It is more than 5 years since the prescribed deadline, 30 December 2002, for all categories of towns covered by the Biomedical Waste Management (BMW) Rules 1998 elapsed. Various reports indicate that the implementation of the BMW Rules is not satisfactory even in the large towns and cities in India. Few studies have looked at the ;macro system' of the biomedical waste management in India. In this context the present study describes the role of the important stakeholders who comprise the 'macrosystem' namely the pollution control board, common waste management facilities, municipal corporation, state government (Directorate of Medical Education and Health Systems Development Project), professional agencies such as the India Medical Association and non-governmental organizations, in the implementation of BMW rules in a capital city of a state in south India. Brief descriptions of the ;micro-system' (i.e. biomedical waste management practices within a hospital) of six hospitals of different types in the study city are also presented.

PubMed Disclaimer

Similar articles

  • Biomedical waste generation in Puducherry Government General Hospital and its management implications. Boss UJ, Moli GP, Roy G, Prasad KV. Boss UJ, et al. J Environ Health. 2009 May;71(9):54-8. J Environ Health. 2009. PMID: 19452838
  • Municipal solid waste management in Kolkata, India - a review. Chattopadhyay S, Dutta A, Ray S. Chattopadhyay S, et al. Waste Manag. 2009 Apr;29(4):1449-58. doi: 10.1016/j.wasman.2008.08.030. Epub 2008 Dec 12. Waste Manag. 2009. PMID: 19070474 Review.
  • Rules and management of biomedical waste at Vivekananda Polyclinic: a case study. Gupta S, Boojh R, Mishra A, Chandra H. Gupta S, et al. Waste Manag. 2009 Feb;29(2):812-9. doi: 10.1016/j.wasman.2008.06.009. Epub 2008 Aug 5. Waste Manag. 2009. PMID: 18684608
  • Biomedical waste management in nursing homes and smaller hospitals in Delhi. Verma LK, Mani S, Sinha N, Rana S. Verma LK, et al. Waste Manag. 2008 Dec;28(12):2723-34. doi: 10.1016/j.wasman.2007.12.013. Epub 2008 Mar 20. Waste Manag. 2008. PMID: 18358710
  • Municipal solid waste management in Indian cities - A review. Sharholy M, Ahmad K, Mahmood G, Trivedi RC. Sharholy M, et al. Waste Manag. 2008;28(2):459-67. doi: 10.1016/j.wasman.2007.02.008. Epub 2007 Apr 12. Waste Manag. 2008. PMID: 17433664 Review.
  • Biomedical waste disposal practices among healthcare workers during COVID-19 pandemic in secondary and tertiary care facilities of Tamil Nadu. Krishnamoorthy Y, R A, Rajaa S, Samuel G, Sinha I. Krishnamoorthy Y, et al. Indian J Med Microbiol. 2022 Oct-Dec;40(4):496-500. doi: 10.1016/j.ijmmb.2022.08.011. Epub 2022 Sep 10. Indian J Med Microbiol. 2022. PMID: 36096850 Free PMC article.
  • Assessment of Biomedical Waste Management in Health Facilities of Uttar Pradesh: An Observational Study. Dixit AM, Bansal P, Jain P, Bajpai PK, Rath RS, Kharya P. Dixit AM, et al. Cureus. 2021 Dec 2;13(12):e20098. doi: 10.7759/cureus.20098. eCollection 2021 Dec. Cureus. 2021. PMID: 34993039 Free PMC article.
  • Staff perception on biomedical or health care waste management: a qualitative study in a rural tertiary care hospital in India. Joshi SC, Diwan V, Tamhankar AJ, Joshi R, Shah H, Sharma M, Pathak A, Macaden R, Stålsby Lundborg C. Joshi SC, et al. PLoS One. 2015 May 29;10(5):e0128383. doi: 10.1371/journal.pone.0128383. eCollection 2015. PLoS One. 2015. PMID: 26023783 Free PMC article. Clinical Trial.
  • A descriptive study on evaluation of bio-medical waste management in a tertiary care public hospital of North India. Kumar R, Gupta AK, Aggarwal AK, Kumar A. Kumar R, et al. J Environ Health Sci Eng. 2014 Apr 17;12:69. doi: 10.1186/2052-336X-12-69. eCollection 2014. J Environ Health Sci Eng. 2014. PMID: 24742274 Free PMC article.
  • Bio-medical waste management: situational analysis & predictors of performances in 25 districts across 20 Indian States. INCLEN Program Evaluation Network (IPEN) study group, New Delhi, India. INCLEN Program Evaluation Network (IPEN) study group, New Delhi, India. Indian J Med Res. 2014 Jan;139(1):141-53. Indian J Med Res. 2014. PMID: 24604049 Free PMC article.
  • Search in MeSH

LinkOut - more resources

Full text sources.

full text provider logo

  • Citation Manager

NCBI Literature Resources

MeSH PMC Bookshelf Disclaimer

The PubMed wordmark and PubMed logo are registered trademarks of the U.S. Department of Health and Human Services (HHS). Unauthorized use of these marks is strictly prohibited.

Academia.edu no longer supports Internet Explorer.

To browse Academia.edu and the wider internet faster and more securely, please take a few seconds to  upgrade your browser .

Enter the email address you signed up with and we'll email you a reset link.

  • We're Hiring!
  • Help Center

paper cover thumbnail

Hospital waste management and toxicity evaluation: a case study

Profile image of aneesh varghese

2007, Waste management

Related Papers

Journal of Sustainable Chemistry and Pharmacy

Konstantin Aravossis ΑΡΑΒΩΣΗΣ , Gregory Kyriakopoulos , A. Vantarakis

At this study a multi-criteria model was developed to examine the available procedures, techniques and methods of handling infectious waste in the large healthcare unit of University Regional General Hospital of Patras, Western Greece. Particularly, this study examined the: a) current legislation and Directives issued for medical waste management at Greece and among the other EU-members, b) contribution of healthcare wastes (HCW) generation rate on social and economic parameters in selected European countries, c) available procedures, techniques, and methods upon the disposal of infectious wastes at the healthcare studied, and, d) propositions for integrated management of such hazardous wastes. Specifically, the Analytic Hierarchy Process (AHP) methodology was applied under pair wise comparison matrices in two stages: 1) the scale factors and the indicators , and 2) the criteria and their sub-criteria. The assessment of these pair wise matrices included the indicators and the sub-criteria. Subsequently, two pair wise comparison matrices, upon a) the "Fulfillment of environmental objectives" indicator and b) the "Energy consumption" sub criterion, were denoted. The AHP methodology yielded good results; however there is still space of improving the environmental performance. The normalized relative weights obtained for the criteria and sub criteria motivated specific actions that have to be handled. Particularly, the results indicated a very good value in environmental management criteria due the values obtained for the commitment towards the environmental policy standards and the waste management procedures. However, further improvements on staff awareness (such as development programs to enhance sensitivity) and more green purchasing suppliers, should be further addressed.

hospital waste management case study

Health Systems and Policy Research

Sadia Hassan Sherani

Abdoliman Amouei

birol elevli

The fundamental information for selecting and designing the most efficient treatment method of hos - pital waste is obtained by means of waste composition analysis. Therefore, the aim of this study was to evaluate the physical and elemental composition of waste in four hospitals in Sivas, Turkey. The results should help us select and design proper waste disposal. During the study period it was estimated that the daily waste generation rate of four hospitals was 985 kg/day, projected to be 1267 kg/day in 2015. Further- more, analysis indicated that the moisture content of wastes was 14,2 % . The four hospital wastes consist of 92% combustible wastes and 8% noncombustible wastes by mass. The combustible wastes constitute paper (16%), textiles (10,2%), cardboard (4%), plastics (41,2%) and food waste (17%). Since the ratio of combustible waste is high, the incineration method has been suggested as a proper disposal method.

International Journal of Environment and Waste Management

Rachid CHAIB

Journal Biomedical and Biopharmaceutical Research

Beatriz Edra

Mohammad Ahmadpour

Background and Objective: Aggregating, sorting, and disposing of hospital wastes is of critical importance, given the risk they impose on the public health. Therefore, the present study is aimed at examining medical waste management system in educational medical centers associated with Urmia University of Medical Science in 2013. Materials and Methods: The study was carried out as a cross sectional work in all medical and educational centers associate with Urmia University of Medical Science through description, questionnaire, observation, and interview. The collected data was analyzed in Excel. Results: The results showed that 40% of the hospitals under study had received waste management operation plan and only 20% of them had prepared a list of hazardous materials produced in the hospital. Standards of handling chemical waste was not followed in any of the hospitals. The centers under study produced 4465 kg medical waste every day; out of which, 1897 kg (42%) was infectious waste...

Dr. Kalsoom Saleem

waste-forum

Fatmawada S.

This study aims at analyzing the management of hazardous medical waste at General Regional Hospital of Biak, Papua. The method used is descriptive research with a qualitative approach. The results showed that the General Regional Hospital of Biak, Papua had not implemented the Standard Operational Procedures (SOP) which had been determined in the handling the hazardous waste in the hospital, such as the container stage, transportation stage, and temporary storage stage up to the waste treatment stage. The lack of training for hospital staff has an impact on the implementation of hazardous medical waste management planning. The General Regional Hospital of Biak, Papua had not implemented the SOP for handling the hazardous waste in the hospital. The hospital need an adequate strategy for hospital hazardous medical waste management which can greatly assist in reducing the harmful effects of hospital waste.

“Sustainable Development and Planning II”, WIT Press. UK,

Konstantin Aravossis ΑΡΑΒΩΣΗΣ

The main objective of this study is the evaluation of medical waste management in Thessaly region, Greece. Nowadays, medical waste treatment and disposal is one of the most important problems in many countries. The reason is simple. Medical waste and specifically infectious medical waste disposal could be extremely dangerous, especially if it is not controlled, according to the basic principles of waste management. Our research was carried out in the 5 hospitals (1 university and 4 general hospitals) that operate in the region of Thessaly and our findings have shown that most of hospitals use the method of steam sterilization in a mobile treatment unit for their waste treatment. More specifically, private companies, which deal with medical waste treatment, visit the hospitals once per week and sterilize the waste in the mobile unit. On the other hand, the university hospital uses the method of incineration for its waste treatment. Regarding the incinerator, it should be noticed that it is a double chamber incinerator. The primary combustion chamber is used for the waste incineration and the secondary combustion chamber is used for the incineration of the fumes. This incinerator operates without the necessary equipment for the air pollution minimization. The medical wastes that are produced in the other medical facilities in the region are disposed without specific care for the environment. It is the outcome of our research that planning about the optimal medical waste management is essential in the effort to achieve an integrated medical waste management according to the principles of sustainable development.

Loading Preview

Sorry, preview is currently unavailable. You can download the paper by clicking the button above.

RELATED PAPERS

Sustainable Chemistry and Pharmacy

Gregory Kyriakopoulos

Dimitris Komilis

Health Scope

mohamed idris

sushma rudraswamy

Journal of Advances in Environmental Health Research

Amir Reshadi

Journal of Advances in Environmental Health Research (JAEHR)

hamideh akbari

Waste Management

MARIANTHI KERMENIDOU

European Science Review

Stela Meçaj

Mekonnen Getahun

PINTU KUMAR

Waste management

mehrdad askarian

siddaram kalyani

International Journal of Scientific Research in Environmental Sciences

Isam Shahrour

International Journal of Industrial Management

Suriati Deraman

Parandeh M, Khanjani N. The Quantity and Quality of Hospital Waste in Kerman Province and an Overview of Hospital Waste quantities in Iran. World Journal of Applied Sciences, 2012; 17(4):473-479.

Narges Khanjani

Dr. Gawad Alwabr , Ahmed Al-Mikhlafi

Omofunmi Olorunwa

Environmental Progress

Ashok Kumar A KBSS

Waste management & research : the journal of the International Solid Wastes and Public Cleansing Association, ISWA

mustafa ali

RELATED TOPICS

  •   We're Hiring!
  •   Help Center
  • Find new research papers in:
  • Health Sciences
  • Earth Sciences
  • Cognitive Science
  • Mathematics
  • Computer Science
  • Academia ©2024

COMMENTS

  1. Medical waste management in public hospitals: a case study

    wastes in public hospitals was 3.53 kg/bed/day. Moreover, 67.45% of medical wastes in. the hospitals studied included common wastes, but infectious and sharp wastes accounted. for 31.65% of the ...

  2. Healthcare Waste—A Serious Problem for Global Health

    Healthcare waste (HCW) is generated in different healthcare facilities (HCFs), such as hospitals, laboratories, veterinary clinics, research centres and nursing homes. It has been assessed that the majority of medical waste does not pose a risk to humans. It is estimated that 15% of the total amount of produced HCW is hazardous and can be ...

  3. Waste Management and the Perspective of a Green Hospital—A Systematic

    Many studies focused on the use of mathematical algorithms in order to enhance the supply chain and medical waste management [11,12,16,18]. Indeed, medical supply chain network design is one of the critical provision difficulties that, ... letters and small case studies. Nevertheless, this study stands out as the most comprehensive overview of ...

  4. PDF A Case Study of Biomedical Waste Management in Hospitals

    K.Kalaivani Department of Chemical Engineering Anna University, Chennai 600025, India Tel: 91-44-2220-3545-14 E-mail: [email protected]. R.Lavanya Department of Chemical Engineering, Anna University, Chennai 600025, India. E-mail: [email protected]. Biomedical waste management is receiving greater attention due to recent ...

  5. Case Report Comprehensive analysis of hospital solid waste levels and

    In recent research, a series of studies has scrutinized hospital waste management practices, drawing attention to key operational aspects requiring focus and improvement. ... Biomedical solid waste management in an Indian hospital: a case study. Waste Manag., 25 (6) (2005), pp. 592-599. View PDF View article View in Scopus Google Scholar

  6. Hospital waste management and toxicity evaluation: A case study

    Hospital waste management is an imperative environmental and public safety issue, due to the waste's infectious and hazardous character. This paper examines the existing waste strategy of a typical hospital in Greece with a bed capacity of 400-600. The segregation, collection, packaging, storage, transportation and disposal of waste were ...

  7. Long-Term Care Hospitals: A Case Study in Waste

    Abstract. There is substantial waste in U.S. healthcare but little consensus on how to combat it. We identify one source of waste: long-term care hospitals (LTCHs). Using the entry of LTCHs into hospital markets in an event study design, we find that most LTCH patients would have counterfactually received care at Skilled Nursing Facilities—facilities that provide medically similar care but ...

  8. (PDF) HEALTHCARE WASTE MANAGEMENT: A CASE STUDY OF ...

    We reviewed the management of healthcare waste at health-promoting hospitals. and aimed to study the type and quantity of healthcare waste, sto rage, collection, tra nsfer, transportation. and ...

  9. Hospital waste management system

    India promulgated 'Bio-medical W aste (Management and. Handling) Rules' (BMW) in Ju ly 1998. The main objective of. the BMW Rules 1998 was to promote scientific and system-. atic management ...

  10. Environmental and economic assessments of industry-level medical waste

    Effect of COVID-19 pandemic on medical waste management: a case study. J. Environ. Health. Sci, 19 ... A review on emergency disposal and management of medical waste during the COVID-19 pandemic in China. Sci. Total. Environ., 810 (2022), Article 152302, 10.1016/j.scitotenv.2021.152302.

  11. PDF Bio-Medical Waste Management

    282. refers to the temporary holding of small quantities of waste near the point of generation, storage of waste is character-ized by longer holding periods and large waste quantity. Stor-age areas are usually located near where the waste is treated. Any offsite holding of waste is also considered storage.

  12. (PDF) Hospital Waste Management

    Biomedical and Biopharmaceutical Research Health and Society │ Saúde e Sociedade Biomed Biopharm Res. , 2017; (14) 1: , 23-36 DOI: 10.19277/bbr.14.1.147 Jornal de Investigação Biomédica e Biofarmacêutica Hospital waste management - Case study Gestão de Resíduos Hospitalares - Estudo de caso Beatriz Edra1, Catarina Maia 2, Filomena Cardoso 2, José Manuel Silva1 e Maria do Céu Costa3 ...

  13. Contamination of Hospital Surfaces with Bacterial Pathogens under the

    The study was carried out in the First Moscow Infectious Diseases Hospital (Russia), one of the capital's medical institutions designated for the treatment of patients with COVID-19. During the first wave of COVID-19, about 80 patients with moderate to severe courses of the disease were admitted every day.

  14. Hospital waste management and toxicity evaluation: a case study

    Hospital waste management is an imperative environmental and public safety issue, due to the waste's infectious and hazardous character. This paper examines the existing waste strategy of a typical hospital in Greece with a bed capacity of 400-600. The segregation, collection, packaging, storage, transportation and disposal of waste were ...

  15. Hospital Waste Management-A Case Study

    Objective: To assess the current status of Bio-Medical Waste Management at N.C. Medical College and Hospital, Gap Analysis visa -vis Bio-Medical Waste Management Rules, 2016, To initiate necessary interventions for ensuring compliance with new BMW Management of Rules, 2016, Assess the impact of the implementation strategy and to recommend ...

  16. A Case Study of Biomedical Waste Management in Hospitals

    [Show full abstract] Hisar, India having 110 bedded hospital has been chosen for case study and its compliance with Regulatory Notifications for Bio-medical Waste (Management and Handling) Rules ...

  17. Hospital waste management system

    Hazardous Waste. Medical Waste Disposal. It is more than 5 years since the prescribed deadline, 30 December 2002, for all categories of towns covered by the Biomedical Waste Management (BMW) Rules 1998 elapsed. Various reports indicate that the implementation of the BMW Rules is not satisfactory even in the large towns and cities in India. ….

  18. Hospital waste management and toxicity evaluation: a case study

    Hospital waste management and toxicity evaluation: A case study M. Tsakona, E. Anagnostopoulou, E. Gidarakos * Laboratory of Toxic and Hazardous Waste Management, Department of Environmental Engineers, Technical University of Crete, GR-73100 Polytechnioupolis, Chania, Crete, Greece Accepted 26 April 2006 Available online 26 July 2006 Abstract ...

  19. Energy, environment and economy assessment of medical waste disposal

    Section snippets Goal and scope definition. The goal of this study is to evaluate and compare the energy, environmental, and economic performances of the five MW disposal technologies, i.e. Technology 1: rotary kiln incineration, Technology 2: pyrolysis incineration; Technology 3: plasma melting, Technology 4: steam sterilization with landfill; Technology 5: microwave sterilization with landfill.

  20. Medical waste management: a case study in a small size hospital of

    The pilot study on medical waste management optimization has been requested and ... L.E.T. (2005), "Healthcare waste management: a case study. from the National Health Service in Cornwall ...

  21. A new fuzzy bi-objective mixed-integer linear programming for designing

    A new fuzzy bi-objective mixed-integer linear programming for designing a medical waste management network in the Coronavirus epidemic: a case study. Mohammad Shaerpour a School of Industrial & Systems Engineering, ... A real case study from Tehran is examined, and numerical and computational results are provided to prove the model's ...

  22. PDF Hospital Waste Management-a Case Study

    HOSPITAL WASTE MANAGEMENT-A CASE STUDY Shivani1, Syed Khursheed Ahmad2, Saurabh Kumar Garg3, Pintu Kumar3 1M.Tech. Student 2Professor and HoD 3M.Tech. Student 1.2,3Dept. of Civil Engineering, Al-Falah University, Dhauj, Faridabad

  23. Hospital waste management in Libya: A case study

    The average waste generation rate was found to be 1.3 kg/patient/day, comprised of 72% general healthcare waste (non-risk) and 28% hazardous waste. The average general waste composition was: 38% ...